Omics! Omics!

A computational biologist's personal views on new technologies & publications on genomics & proteomics and their impact on drug discovery

Monday, May 31, 2010

Sepsis: A Severe Shock

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At the beginning of the weekend I received a real shock: one of the other father's in TNG's Cub Scout Pack had died of sepsis after ...
1 comment:
Tuesday, May 25, 2010

Guesting over at MolBio Research Highlights

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I have an invited piece on the various sequencing instruments over at MolBio Research Highlights . The fact that much of it is an extended...
1 comment:

Bike in the Commuting Fold

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Okay, a little bragging: I biked into to work last week for Bike to Work week. I actually bike the last leg of my commute a lot of days now ...
Saturday, May 22, 2010

Just say no to programming primitivism

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A consistently reappearing thread in any bioinformatics discussion space is "What programming language should I learn/teach?". As...
7 comments:
Thursday, May 20, 2010

The New Genome on the Block

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The world is abuzz with the announcement by Craig Venter and colleagues that they have successfully booted up a synthetic bacterial genome. ...
Tuesday, May 18, 2010

Journey to Atlantis

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I've only seen it a few times, but the sight of the iconic cavernous building always makes my heart race. But this time even more so, a...
3 comments:
Thursday, May 06, 2010

Sales

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Two weeks ago I participated in a roundtable sponsored by the Massachusetts Technology Leadership Council (MassTLC) titled "R&D IT ...
1 comment:
Saturday, May 01, 2010

Asymptotically Approaching A Grok of Scala

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When learning a new language, it is tempting to fall back on the patterns of a previous language. This isn't always a bad thing but is ...
1 comment:
Thursday, April 29, 2010

Application of Second Generation Sequencing to Cancer Genomics

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A review by me titled " Application of Second Generation Sequencing to Cancer Genomics " is now available on the Advance Access se...
Wednesday, April 14, 2010

The value of cancer genomics

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I recently got around to reading the "Human Genome at 10" issue of Nature. One feature, on facing pages, are opinion pieces by Ro...
3 comments:
Thursday, April 08, 2010

Version Control Failure

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Well, it was inevitable. A huge (and expensive) case of confused human genome versions. While the human genome is 10 years old, that was ha...
3 comments:
Sunday, March 28, 2010

Ridiculous Claims

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An item last week in GenomeWeb covered a new analysis by Robin Cook-Deegan and colleagues of the Myriad BRCA patents. One bit in particula...
Tuesday, March 23, 2010

What should freshman biology cover?

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I've spent some time the last few weeks trying to remember what I learned in freshman biology. Partly this has been triggered by planni...
2 comments:
Thursday, March 18, 2010

Second Generation Sequencing Sample Prep Ecosystems

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A characteristic of each of the existing second generation sequencing instruments is that each manufacturer provides its own collection of s...
3 comments:
Thursday, March 11, 2010

Playing Director

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Last weekend was the Academy Award presentations. Fittingly, just before I had my first theatrical success -- with Actors. Actors are a Sca...
Sunday, February 28, 2010

Programming Fossil Stumble, but Scala School Progresses

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If you watch this space by RSS, make sure you catch the additions and corrections by BioIT World's Kevin Davies and my fellow Codon Devi...
1 comment:
Saturday, February 27, 2010

Last Day of Eavesdropping on Marco Island

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Today was the last day of the Marco Island conference, so I won't be hammering Twitter again for quite a while. The afternoon session f...
5 comments:
Thursday, February 25, 2010

Personalized Annoyance of Research Enthusiast (PARE)

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Last night I finally got my paws on a paper which started out on a frustrating tack. Last week, a flurry of news items heralded a new appro...
1 comment:
Wednesday, February 24, 2010

Marco Island is HOT!

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The Marco Island Advances in Genome Biology and Technology , or AGBT (or just Marco Island) conference started up today. Whatever weather t...
1 comment:
Friday, February 19, 2010

To Stockholm via Ph.D. Thesis

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The Scientist has a profile of Aaron Ciechanover , who shared the Nobel Prize for work on the proteasome. His Nobel-cited work began in his...
7 comments:
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Keith Robison
Dr. Robison spent 10 years at Millennium Pharmaceuticals working with various genomics & proteomics technologies & working on multiple teams attempting to apply these throughout the drug discovery process. He spent 2 years at Codon Devices working on a variety of protein & metabolic engineering projects as well as monitoring a high-throughput gene synthesis facility. After a brief bit of consulting, he rejoined the cancer drug discovery field at Infinity Pharmaceuticals in May 2009. In September 2011 he joined Warp Drive Bio, a startup applying genomics to natural product drug discovery. In February 2019 he joined Ginkgo Bioworks, a synthetic biology company. Other recurring characters in this blog are his late loyal Shih Tzu Amanda, his current Shih Poo Lily and his now adult son alias TNG (The Next Generation). Dr. Robison can be reached via his Gmail account, keith.e.robison@gmail.com You can also follow him on Twitter as @OmicsOmicsBlog.
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