Omics! Omics!

A computational biologist's personal views on new technologies & publications on genomics & proteomics and their impact on drug discovery

Thursday, June 28, 2007

Psst! Hot Stock Tip! This company is going to be average!

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The last two days have been active on the NASDAQ for the old stomping grounds. Prior to the trading day yesterday a stock analyst upgraded ...
1 comment:
Wednesday, June 27, 2007

You say tomasil, I say bamatoe ...

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There are some food combinations which reoccur frequently in the culinary arts. The pairing of basil and tomato is not only a dominant part...

Roche munches again

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Roche is on quite a little acquisition spree in the diagnostics business: first went 454 with its first-to-market sequencing-by-synthesis t...
2 comments:
Friday, June 22, 2007

secneuqes AND sdrawkcaB

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One of my early graduate rotation projects (the period when you are scoping out an advisor -- and the advisor is scoping you out!) in the Ch...
3 comments:
Thursday, June 21, 2007

That's my boy!

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I was out this evening introducing my legacy to the fine points of pea picking. He looked at the hanging pods and asked: "How can you ...
2 comments:
Wednesday, June 20, 2007

Extra! Extra! Mendel was Right!

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I couldn't help but be amused by the headline in today's Boston Glob: " Breast cancer genes can come from father ". Wow! ...
1 comment:
Tuesday, June 19, 2007

Imaging gene expression

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In one of my first posts I commented on the challenge of obtaining samples for microarray and other biomarker work. Getting samples for mic...
Friday, June 15, 2007

Tagging Along on Grand Rounds

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It is an honor that my piece on genome sequencing to explore rare genetic diseases was accepted into Tuesday's Grand Rounds , a venerab...
Thursday, June 14, 2007

Evolution's Spurs

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As I've commented previously, it is pleasing when a new biological finding can be related to something both familiar and pleasing. In t...
Wednesday, June 13, 2007

This Day in History

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This week marks the 18th anniversary of my first attempt to sequence DNA. It did not occur to me then that my destiny would be to interpret...
Monday, June 11, 2007

DNA Under Pressure

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Over at Eye on DNA an MD's op-ed column on genetic association studies is getting a good roasting . The naivete about the interplay of ...
2 comments:
Sunday, June 10, 2007

Temptation Beckons!

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For the last decade plus my main programming language has been Perl. It has served me often and served me well, but during that time I subm...
4 comments:
Saturday, June 09, 2007

When Imagination Trumps Science

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I recently finished an interesting book that was a pure impulse item at the local library -- those scheming librarians put books on display ...
2 comments:
Thursday, June 07, 2007

Illumina-ting DNA-protein interactions

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The new Science (sorry, you'll need a subscription beyond the abstracts) has a bunch of genomics papers, but the one closest to my heart...
Wednesday, June 06, 2007

Purple & White

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When I was out in the garden yesterday a smile was brought to my face by some purple blossoms immediately adjacent to some white ones. Thos...
Tuesday, June 05, 2007

Tagging Up With Protein Microarrays

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Molecular Systems Biology, an open access journal, has an impressive new functional protein microarray paper . The authors identified a lar...
2 comments:
Monday, June 04, 2007

SOLiD-ifying the next generation of sequencing

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ABI announced today that it has has started delivering its SOLiD next generation sequencing instruments to early access customers and will ...
5 comments:
Sunday, June 03, 2007

The Haplotype Challenge

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In yesterday's speculation about chasing rare diseases with full human genome sequences, I completely ignored one major challenge: hapl...
1 comment:

Blog Carnivals & such

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Blog carnivals are a wonderful thing: a bunch of bloggers with related topics take turns writing capsule summaries of other blog entries, fo...
Saturday, June 02, 2007

Genome Sequencing for Unique Genetic Diseases

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The following is based on a chance encounter with a stranger. I don't believe I am violating any ethical lines, but will entertain crit...
10 comments:
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Keith Robison
Dr. Robison spent 10 years at Millennium Pharmaceuticals working with various genomics & proteomics technologies & working on multiple teams attempting to apply these throughout the drug discovery process. He spent 2 years at Codon Devices working on a variety of protein & metabolic engineering projects as well as monitoring a high-throughput gene synthesis facility. After a brief bit of consulting, he rejoined the cancer drug discovery field at Infinity Pharmaceuticals in May 2009. In September 2011 he joined Warp Drive Bio, a startup applying genomics to natural product drug discovery. In February 2019 he joined Ginkgo Bioworks, a synthetic biology company. Other recurring characters in this blog are his late loyal Shih Tzu Amanda, his current Shih Poo Lily and his now adult son alias TNG (The Next Generation). Dr. Robison can be reached via his Gmail account, keith.e.robison@gmail.com You can also follow him on Twitter as @OmicsOmicsBlog.
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